View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0440-3-1-Insertion-18 (Length: 92)

Name: NF0440-3-1-Insertion-18
Description: 454-NF0440-3-1
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0440-3-1-Insertion-18
NF0440-3-1-Insertion-18
[»] chr7 (1 HSPs)
chr7 (1-92)||(28335897-28335986)


Alignment Details
Target: chr7 (Bit Score: 50; Significance: 3e-20; HSPs: 1)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 50; E-Value: 3e-20
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 28335897 - 28335986
Alignment:
1 ctaacttccacactagagtgttagatacggttgtctgagnnnnnnnagctacaatgataaaaggataaaaatgcaaaaatagcccgtttgat 92  Q
    |||||||||||||||||||||||||||||||||| ||||       |||||| |||||||||||||||||||||||||||||| ||||||||    
28335897 ctaacttccacactagagtgttagatacggttgtttgag-ttttttagctac-atgataaaaggataaaaatgcaaaaatagctcgtttgat 28335986  T

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