View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1883-3-Insertion-7 (Length: 166)

Name: NF1883-3-Insertion-7
Description: 454-NF1883-3
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1883-3-Insertion-7
NF1883-3-Insertion-7
[»] chr3 (1 HSPs)
chr3 (1-166)||(41463419-41463584)


Alignment Details
Target: chr3 (Bit Score: 158; Significance: 2e-84; HSPs: 1)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 158; E-Value: 2e-84
Query Start/End: Original strand, 1 - 166
Target Start/End: Complemental strand, 41463584 - 41463419
Alignment:
1 catacaacttggaataccttacctctaggtacaaaccaatagcttgtcttagtgattactccaagtacaacgtttttgcaacaccttcacttactgcgtt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
41463584 catacaacttggaataccttacctctaggtacaaaccaatagcttgtcttagtgattactccaagtacaacgtttttgcaacaccttcacttactgtgtt 41463485  T
101 tgtgcacttgtcgtctgtctgtgatttggttgatactgttaacgtgccggttcaatcgccgttttt 166  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
41463484 tgtgcacttgtcgtctgtctgtgatttggttgataccgttaacgtgccggttcaatcgccgttttt 41463419  T

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